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petsc: fix build by detecting updated UCX warning message in patch #307300

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Apr 29, 2024
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petsc: fix build by detecting updated UCX warning message in patch #307300

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26 changes: 13 additions & 13 deletions pkgs/development/libraries/science/math/petsc/filter_mpi_warnings.patch
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Original file line number Diff line number Diff line change
@@ -1,100 +1,100 @@
diff --git a/src/snes/tutorials/makefile b/src/snes/tutorials/makefile
index 168febb34b6..71068469066 100644
index 672a62a..a5fd1c4 100644
--- a/src/snes/tutorials/makefile
+++ b/src/snes/tutorials/makefile
@@ -13,6 +13,7 @@ include ${PETSC_DIR}/lib/petsc/conf/rules
# these tests are used by the makefile in PETSC_DIR for basic tests of the install and should not be removed
testex5f: ex5f.PETSc
-@${MPIEXEC} -n 1 ${MPIEXEC_TAIL} ./ex5f -snes_rtol 1e-4 > ex5f_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex5f_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex5f_1.tmp; \
if (${DIFF} output/ex5f_1.testout ex5f_1.tmp > /dev/null 2>&1) then \
echo "Fortran example src/snes/tutorials/ex5f run successfully with 1 MPI process"; \
else \
@@ -25,6 +26,7 @@ testex5f: ex5f.PETSc
${MAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} ex5f.rm;
testex19: ex19.PETSc
-@${MPIEXEC} -n 1 ${MPIEXEC_TAIL} ./ex19 -da_refine 3 -pc_type mg -ksp_type fgmres > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_1.testout ex19_1.tmp > /dev/null 2>&1) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with 1 MPI process"; \
else \
@@ -36,6 +38,7 @@ testex19: ex19.PETSc
${RM} -f ex19_1.tmp;
testex19_mpi:
-@${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex19 -da_refine 3 -pc_type mg -ksp_type fgmres > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_1.testout ex19_1.tmp > /dev/null 2>&1) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with 2 MPI processes"; \
else \
@@ -48,6 +51,7 @@ testex19_mpi:
#use unpreconditioned norm because HYPRE device installations use different AMG parameters
runex19_hypre:
-@${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex19 -da_refine 3 -snes_monitor_short -ksp_norm_type unpreconditioned -pc_type hypre > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_hypre.out ex19_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with hypre"; \
else \
@@ -57,6 +61,7 @@ runex19_hypre:
${RM} -f ex19_1.tmp
runex19_hypre_cuda:
-@${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex19 -dm_vec_type cuda -dm_mat_type aijcusparse -da_refine 3 -snes_monitor_short -ksp_norm_type unpreconditioned -pc_type hypre > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_hypre.out ex19_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with hypre/cuda"; \
else \
@@ -66,6 +71,7 @@ runex19_hypre_cuda:
${RM} -f ex19_1.tmp
runex19_hypre_hip:
-@${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex19 -dm_vec_type hip -da_refine 3 -snes_monitor_short -ksp_norm_type unpreconditioned -pc_type hypre > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_hypre.out ex19_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with hypre/hip"; \
else \
@@ -75,6 +81,7 @@ runex19_hypre_hip:
${RM} -f ex19_1.tmp
runex19_cuda:
-@${MPIEXEC} -n 1 ${MPIEXEC_TAIL} ./ex19 -snes_monitor -dm_mat_type seqaijcusparse -dm_vec_type seqcuda -pc_type gamg -pc_gamg_esteig_ksp_max_it 10 -ksp_monitor -mg_levels_ksp_max_it 3 > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_cuda_1.out ex19_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with cuda"; \
else \
@@ -84,6 +91,7 @@ runex19_cuda:
${RM} -f ex19_1.tmp
runex19_ml:
-@${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex19 -da_refine 3 -snes_monitor_short -pc_type ml > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_ml.out ex19_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with ml"; \
else \
@@ -93,6 +101,7 @@ runex19_ml:
${RM} -f ex19_1.tmp
runex19_fieldsplit_mumps:
-@${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex19 -pc_type fieldsplit -pc_fieldsplit_block_size 4 -pc_fieldsplit_type SCHUR -pc_fieldsplit_0_fields 0,1,2 -pc_fieldsplit_1_fields 3 -fieldsplit_0_pc_type lu -fieldsplit_1_pc_type lu -snes_monitor_short -ksp_monitor_short -fieldsplit_0_pc_factor_mat_solver_type mumps -fieldsplit_1_pc_factor_mat_solver_type mumps > ex19_6.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_6.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_6.tmp; \
if (${DIFF} output/ex19_fieldsplit_5.out ex19_6.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with mumps"; \
else \
@@ -102,6 +111,7 @@ runex19_fieldsplit_mumps:
${RM} -f ex19_6.tmp
runex19_superlu_dist:
-@${MPIEXEC} -n 1 ${MPIEXEC_TAIL} ./ex19 -da_grid_x 20 -da_grid_y 20 -pc_type lu -pc_factor_mat_solver_type superlu_dist > ex19.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19.tmp; \
if (${DIFF} output/ex19_superlu.out ex19.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with superlu_dist"; \
else \
@@ -111,6 +121,7 @@ runex19_superlu_dist:
${RM} -f ex19.tmp
runex19_suitesparse:
-@${MPIEXEC} -n 1 ${MPIEXEC_TAIL} ./ex19 -da_refine 3 -snes_monitor_short -pc_type lu -pc_factor_mat_solver_type umfpack > ex19_1.tmp 2>&1; \
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex19_1.tmp; \
if (${DIFF} output/ex19_suitesparse.out ex19_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex19 run successfully with suitesparse"; \
else \
@@ -120,6 +131,7 @@ runex19_suitesparse:
${RM} -f ex19_1.tmp
runex3k_kokkos: ex3k.PETSc
-@OMP_PROC_BIND=false ${MPIEXEC} -n 2 ${MPIEXEC_TAIL} ./ex3k -view_initial -dm_vec_type kokkos -dm_mat_type aijkokkos -use_gpu_aware_mpi 0 -snes_monitor > ex3k_1.tmp 2>&1 ;\
+ sed -i '/hwloc\/linux/d ; /ERROR opendir(\/sys\/class\/net) failed/d' ex3k_1.tmp; \
+ sed -i '/hwloc\/linux/d ; /ERROR scandir(\/sys\/class\/net) failed/d' ex3k_1.tmp; \
if (${DIFF} output/ex3k_1.out ex3k_1.tmp) then \
echo "C/C++ example src/snes/tutorials/ex3k run successfully with kokkos-kernels"; \
else \