Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
897 changed files
with
138,093 additions
and
35,726 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,39 @@ | ||
| # This workflow will install Python dependencies, run tests and lint with a variety of Python versions | ||
| # For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | ||
|
|
||
| name: Python package | ||
|
|
||
| on: | ||
| push: | ||
| branches: [ master, develop ] | ||
| pull_request: | ||
| branches: [ master, develop ] | ||
|
|
||
| jobs: | ||
| build: | ||
|
|
||
| runs-on: ubuntu-latest | ||
| strategy: | ||
| matrix: | ||
| python-version: [3.6, 3.7, 3.8] | ||
|
|
||
| steps: | ||
| - uses: actions/checkout@v2 | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v2 | ||
| with: | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Install dependencies | ||
| run: | | ||
| python -m pip install --upgrade pip | ||
| pip install flake8 pytest | ||
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | ||
| - name: Lint with flake8 | ||
| run: | | ||
| # stop the build if there are Python syntax errors or undefined names | ||
| flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics | ||
| # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide | ||
| flake8 . --count --exit-zero --max-complexity=10 --max-line-length=90 --statistics | ||
| #- name: Test with pytest | ||
| # run: | | ||
| # pytest |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
|
|
@@ -13,6 +13,8 @@ settings.json | |
| # build directories | ||
| /build-* | ||
| /build | ||
| /install-* | ||
| /install | ||
| /examples/**/build* | ||
| /_skbuild | ||
|
|
||
|
|
||
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
File renamed without changes.
File renamed without changes.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,210 @@ | ||
| # Copyright 2013-2020 Lawrence Livermore National Security, LLC and other | ||
| # Spack Project Developers. See the top-level COPYRIGHT file for details. | ||
| # | ||
| # SPDX-License-Identifier: (Apache-2.0 OR MIT) | ||
| # | ||
| # ---------------------------------------------------------------------------- | ||
|
|
||
| from spack import * | ||
| from sys import platform | ||
|
|
||
|
|
||
| class Timemory(CMakePackage): | ||
| """Timing + Memory + Hardware Counter Utilities for C/C++/CUDA/Python""" | ||
|
|
||
| homepage = 'https://timemory.readthedocs.io/en/latest/' | ||
| git = 'https://github.com/NERSC/timemory.git' | ||
| maintainers = ['jrmadsen'] | ||
|
|
||
| version('master', branch='master', submodules=True) | ||
| version('develop', branch='develop', submodules=True) | ||
| version('3.0.1', commit='ef638e1cde90275ce7c0e12fc4902c27bcbdeefd', | ||
| submodules=True) | ||
| version('3.0.0', commit='b36b1673b2c6b7ff3126d8261bef0f8f176c7beb', | ||
| submodules=True) | ||
|
|
||
| linux = False if platform == 'darwin' else True | ||
|
|
||
| variant('shared', default=True, description='Build shared libraries') | ||
| variant('static', default=False, description='Build static libraries') | ||
| variant('python', default=True, description='Enable Python support') | ||
| variant('mpi', default=True, description='Enable MPI support') | ||
| variant('tau', default=False, description='Enable TAU support') | ||
| variant('papi', default=linux, description='Enable PAPI support') | ||
| variant('cuda', default=linux, description='Enable CUDA support') | ||
| variant('cupti', default=linux, description='Enable CUPTI support') | ||
| variant('tools', default=True, description='Build/install extra tools') | ||
| variant('vtune', default=False, description='Enable VTune support') | ||
| variant('upcxx', default=False, description='Enable UPC++ support') | ||
| variant('gotcha', default=linux, description='Enable GOTCHA support') | ||
| variant('likwid', default=linux, description='Enable LIKWID support') | ||
| variant('caliper', default=False, description='Enable Caliper support') | ||
| variant('dyninst', default=linux, | ||
| description='Build dynamic instrumentation tools') | ||
| variant('examples', default=False, description='Build/install examples') | ||
| variant('gperftools', default=True, | ||
| description='Enable gperftools support') | ||
| variant('kokkos_tools', default=True, | ||
| description=('Build generic kokkos-tools libraries, e.g. ' | ||
| 'kp_timemory, kp_timemory_filter')) | ||
| variant('kokkos_build_config', default=False, | ||
| description=('Build pre-configured (i.e. dedicated) kokkos-tools ' | ||
| 'libraries, e.g. kp_timemory_cpu_flops')) | ||
| variant('cuda_arch', default='auto', description='CUDA architecture name', | ||
| values=('auto', 'kepler', 'tesla', 'maxwell', 'pascal', | ||
| 'volta', 'turing'), multi=False) | ||
| variant('cpu_target', default='auto', | ||
| description=('Build for specific cpu architecture (specify ' | ||
| 'cpu-model)')) | ||
| variant('use_arch', default=False, | ||
| description=('Build all of timemory w/ cpu_target architecture ' | ||
| 'flags (default: roofline toolkit only)')) | ||
| variant('tls_model', default='global-dynamic', | ||
| description='Thread-local static model', multi=False, | ||
| values=('global-dynamic', 'local-dynamic', 'initial-exec', | ||
| 'local-exec')) | ||
| variant('lto', default=False, | ||
| description='Build w/ link-time optimization') | ||
| variant('statistics', default=True, | ||
| description=('Build components w/ support for statistics ' | ||
| '(min/max/stddev)')) | ||
| variant('extra_optimizations', default=True, | ||
| description='Build timemory with extra optimization flags') | ||
| variant('cxxstd', default='14', description='C++ language standard', | ||
| values=('14', '17', '20'), multi=False) | ||
| variant('mpip_library', default=linux, | ||
| description='Build stand-alone timemory-mpip GOTCHA library') | ||
| variant('ompt', default=True, description=('Enable OpenMP tools support')) | ||
| variant('ompt_standalone', default=True, | ||
| description=('Enable OpenMP tools support via drop-in ' | ||
| 'replacement of libomp/libgomp/libiomp5')) | ||
| variant('ompt_llvm', default=False, | ||
| description='Enable OpenMP tools support as part of llvm build') | ||
| variant('ompt_library', default=True, | ||
| description='Build stand-alone timemory-ompt library') | ||
| variant('allinea_map', default=False, | ||
| description='Enable Allinea ARM-MAP support') | ||
| variant('require_packages', default=False, | ||
| description=('find_package(...) resulting in NOTFOUND ' | ||
| 'generates error')) | ||
|
|
||
| depends_on('cmake@3.11:', type='build') | ||
|
|
||
| extends('python', when='+python') | ||
| depends_on('python@3:', when='+python', type=('build', 'run')) | ||
| depends_on('py-numpy', when='+python', type=('run')) | ||
| depends_on('py-pillow', when='+python', type=('run')) | ||
| depends_on('py-matplotlib', when='+python', type=('run')) | ||
| depends_on('mpi', when='+mpi') | ||
| depends_on('tau', when='+tau') | ||
| depends_on('papi', when='+papi') | ||
| depends_on('cuda', when='+cuda') | ||
| depends_on('cuda', when='+cupti') | ||
| depends_on('upcxx', when='+upcxx') | ||
| depends_on('likwid', when='+likwid') | ||
| depends_on('gotcha', when='+gotcha') | ||
| depends_on('caliper', when='+caliper') | ||
| depends_on('dyninst', when='+dyninst') | ||
| depends_on('gperftools', when='+gperftools') | ||
| depends_on('intel-parallel-studio', when='+vtune') | ||
| depends_on('llvm-openmp-ompt+standalone', when='+ompt_standalone') | ||
| depends_on('llvm-openmp-ompt~standalone', when='+ompt_llvm') | ||
| depends_on('arm-forge', when='+allinea_map') | ||
|
|
||
| conflicts('+python', when='~shared', | ||
| msg='+python requires building shared libraries') | ||
| conflicts('+cupti', when='~cuda', msg='CUPTI requires CUDA') | ||
| conflicts('+kokkos_tools', when='~tools', | ||
| msg='+kokkos_tools requires +tools') | ||
| conflicts('+kokkos_build_config', when='~tools', | ||
| msg='+kokkos_build_config requires +tools') | ||
| conflicts('+kokkos_build_config', when='~kokkos_tools', | ||
| msg='+kokkos_build_config requires +kokkos_tools') | ||
| conflicts('tls_model=local-dynamic', when='+python', | ||
| msg='+python require tls_model=global-dynamic') | ||
| conflicts('tls_model=initial-exec', when='+python', | ||
| msg='+python require tls_model=global-dynamic') | ||
| conflicts('tls_model=local-exec', when='+python', | ||
| msg='+python require tls_model=global-dynamic') | ||
| conflicts('+mpip_library', when='~mpi', msg='+mpip_library requires +mpi') | ||
| conflicts('+mpip_library', when='~gotcha', | ||
| msg='+mpip_library requires +gotcha') | ||
| conflicts('+mpip_library', when='~shared', | ||
| msg='+mpip_library requires building shared libraries') | ||
| conflicts('+ompt_standalone', when='~ompt', | ||
| msg='+ompt_standalone requires +ompt') | ||
| conflicts('+ompt_llvm', when='~ompt', | ||
| msg='+ompt_llvm requires +ompt') | ||
| conflicts('+ompt_library', when='~ompt', | ||
| msg='+ompt_library requires +ompt') | ||
| conflicts('+ompt_library', when='~shared~static', | ||
| msg='+ompt_library requires building shared or static libraries') | ||
| conflicts('+ompt_standalone+ompt_llvm', | ||
| msg=('+ompt_standalone and +ompt_llvm are not compatible. Use ' | ||
| '+ompt_llvm~ompt_standalone if building LLVM, use ' | ||
| '~ompt_llvm+ompt_standalone if ompt.h is not provided by ' | ||
| 'the compiler')) | ||
|
|
||
| def cmake_args(self): | ||
| spec = self.spec | ||
|
|
||
| args = [ | ||
| '-DTIMEMORY_BUILD_PYTHON=ON', | ||
| '-DTIMEMORY_BUILD_TESTING=OFF', | ||
| '-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON', | ||
| ] | ||
|
|
||
| cxxstd = spec.variants['cxxstd'].value | ||
| args.append('-DCMAKE_CXX_STANDARD={0}'.format(cxxstd)) | ||
|
|
||
| tls = spec.variants['tls_model'].value | ||
| args.append('-DTIMEMORY_TLS_MODEL={0}'.format(tls)) | ||
|
|
||
| if '+python' in spec: | ||
| args.append('-DPYTHON_EXECUTABLE={0}'.format( | ||
| spec['python'].command.path)) | ||
|
|
||
| if '+mpi' in spec: | ||
| args.append('-DTIMEMORY_USE_MPI_LINK_FLAGS=OFF') | ||
| args.append('-DMPI_C_COMPILER={0}'.format(spec['mpi'].mpicc)) | ||
| args.append('-DMPI_CXX_COMPILER={0}'.format(spec['mpi'].mpicxx)) | ||
|
|
||
| if '+cuda' in spec: | ||
| targ = spec.variants['cuda_arch'].value | ||
| key = '' if spec.satisfies('@:3.0.1') else 'TIMEMORY_' | ||
| # newer versions use 'TIMEMORY_CUDA_ARCH' | ||
| args.append('-D{0}CUDA_ARCH={1}'.format(key, targ)) | ||
|
|
||
| cpu_target = spec.variants['cpu_target'].value | ||
| if cpu_target == 'auto': | ||
| args.append('-DCpuArch_TARGET={0}'.format(cpu_target)) | ||
|
|
||
| # forced disabling of submodule builds | ||
| for dep in ('caliper', 'gotcha', 'ompt'): | ||
| args.append('-DTIMEMORY_BUILD_{0}=OFF'.format(dep.upper())) | ||
|
|
||
| # spack options which translate to TIMEMORY_<OPTION> | ||
| for dep in ('require_packages', 'kokkos_build_config', 'use_arch'): | ||
| args.append('-DTIMEMORY_{0}={1}'.format( | ||
| dep.upper(), 'ON' if '+{0}'.format(dep) in spec else 'OFF')) | ||
|
|
||
| # spack options which translate to BUILD_<OPTION>_LIBS | ||
| for dep in ('shared', 'static'): | ||
| args.append('-DBUILD_{0}_LIBS={1}'.format( | ||
| dep.upper(), 'ON' if '+{0}'.format(dep) in spec else 'OFF')) | ||
|
|
||
| # spack options which translate to TIMEMORY_BUILD_<OPTION> | ||
| for dep in ('tools', 'examples', 'kokkos_tools', 'lto', | ||
| 'extra_optimizations', 'mpip_library', 'ompt_library'): | ||
| args.append('-DTIMEMORY_BUILD_{0}={1}'.format( | ||
| dep.upper(), 'ON' if '+{0}'.format(dep) in spec else 'OFF')) | ||
|
|
||
| # spack options which translate to TIMEMORY_USE_<OPTION> | ||
| for dep in ('allinea_map', 'python', 'mpi', 'tau', 'papi', 'ompt', | ||
| 'cuda', 'cupti', 'cupti', 'vtune', 'upcxx', 'gotcha', | ||
| 'likwid', 'caliper', 'dyninst', 'gperftools', | ||
| 'statistics'): | ||
| args.append('-DTIMEMORY_USE_{0}={1}'.format( | ||
| dep.upper(), 'ON' if '+{0}'.format(dep) in spec else 'OFF')) | ||
|
|
||
| return args |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,4 @@ | ||
| Cython | ||
| scikit-build | ||
| cmake | ||
| ninja |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,5 @@ | ||
| IPython>=0.13 | ||
| numpy | ||
| matplotlib | ||
| pillow | ||
| six |
Oops, something went wrong.