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Release 4.3

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@halx halx released this 19 Apr 11:19
· 2 commits to main since this release

New in REINVENT 4.3

For details see CHANGELOG.md.

  • Upgrade to PyTorch 2.2: rerun pip install -r requirements-linux-64.lock
  • 2 new notebooks demoing Reinvent with reinforcement learning and also transfer learning, includes TensorBoard visualisation and basic analysis
  • New Linkinvent model code based on unified transformer
  • New PubChem Mol2Mol prior
  • Unknown token support for PubChem based transformer models
  • New "device" config parameter to allow for explicit device e.g. "cuda:0"
  • Optional SMILES randomization in every TL epoch for Reinvent
  • Dataclass parameter validation for most scoring components
  • Invalid SMILES are now written to the reinforcement learning CSV
  • Code improvements and fixes