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Maine-eDNA

The Maine-eDNA project is a 5-year research, education and outreach program that seeks to transform our understanding and sustainability of Maine’s coastal ecosystems via environmental DNA (eDNA) innovations and state-wide multi-institutional collaboration. This project brings together several of the state's public and private academic institutions and independent research laboratories to focus on a shared goal of applying eDNA approaches to understand coastal ecosystem dynamics across spatial and temporal scales. The vision of Maine-eDNA is to show how the eDNA approach can transform how aquatic ecosystems are studied and managed.

Supported by NSF Award #OIA-1849227 RII Track-1: Molecule to Ecosystem: Environmental DNA as a Nexus of Coastal Ecosystem Sustainability for Maine (Maine-eDNA).


Project Links


Maine-eDNA

Pinned

  1. medna-metadata medna-metadata Public

    An open-source data management system for tracking environmental DNA samples and metadata

    Python 10 2

  2. Maine-eDNA.github.io Maine-eDNA.github.io Public

    Metabarcoding Analysis Self-Guided Tutorial Website

    HTML

  3. medna_survey123 medna_survey123 Public

    Python module for downloading FGDB or CSVs from an ArcGIS Online feature layer, cleaning and joining the data, and uploading to Google Sheets.

    Python

Repositories

Showing 9 of 9 repositories
  • mednaTaxaRef Public

    Development of an R toolset to generate reference databases for use in Maine-eDNA sequence analyses based on merging existing functionalities

    R 2 2 12 0 Updated Mar 14, 2024
  • medna-metadata Public

    An open-source data management system for tracking environmental DNA samples and metadata

    Python 10 GPL-3.0 2 0 0 Updated Jan 24, 2024
  • Maine-eDNA.github.io Public

    Metabarcoding Analysis Self-Guided Tutorial Website

    HTML 0 0 1 0 Updated Jan 22, 2024
  • 12sRef Public

    12s Reference Library

    1 1 5 0 Updated Nov 6, 2023
  • medna_survey123 Public

    Python module for downloading FGDB or CSVs from an ArcGIS Online feature layer, cleaning and joining the data, and uploading to Google Sheets.

    Python 0 GPL-3.0 0 0 0 Updated Sep 4, 2023
  • Maine-Edna-Freezer-Mapping-iOS Public

    This is the iOS base station to be used beside the freezer.

    Swift 0 0 0 0 Updated Apr 26, 2023
  • qPCR_Limit-of-Detection Public

    Calculates limit of detection and PCR efficiency from qPCR dilution series Ct values.

    R 0 CC0-1.0 0 0 0 Updated Feb 20, 2023
  • abbagadabba Public

    Amplicon-based biodiversity assessment, gap analysis, database building, and more!

    R 2 GPL-3.0 3 8 0 Updated Aug 29, 2022
  • .github Public
    0 0 0 0 Updated Mar 31, 2022

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