-
Notifications
You must be signed in to change notification settings - Fork 0
The code of "Identification of moderate effect size genes in autism spectrum disorder through a novel gene pairing approach"
License
MahjaniLab/MES_Code
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
Folders and files
Name | Name | Last commit message | Last commit date | |
---|---|---|---|---|
Repository files navigation
Identification of moderate effect size genes in autism spectrum disorder through a novel gene pairing approach Author: Madison Caballero Preprint: https://doi.org/10.1101/2024.04.03.24305278 Folder descriptions: 1_MES_screen: Code and files related to the initial screen of MES genes (Figure 2 Steps 1-4). Individual-level data is not included. 2_MES_non_neuro : Code/commands for extracting deleterious variants in the three non-neuro cohorts. This folder includes code for the equilibrium test. 3_MES_synonymous : Combination of code and files for the equivalence of 1_MES_screen and 2_MES_non_neuro for synonymous variants. Only code with changes are included. Other code and commands are otherwise unchanged. 4_Expression : Code and results for gene expression analyses. 5_Phenotypes : Code and results for phenotype analyses. Packages and versions used: R (v4.2.0) stringr (v1.5.1) tidyverse (v1.3.1) rapport (v1.1)
About
The code of "Identification of moderate effect size genes in autism spectrum disorder through a novel gene pairing approach"
Topics
Resources
License
Stars
Watchers
Forks
Releases
No releases published
Packages 0
No packages published