sectionizer configs added for brat (3) and medspaCy/CAS XMI

Three new brat sectionizer configs were added. One for the
BigODM corpus and two variants for the Textractor corpus
(differing in which normalization engine is used). The last
config file works with medspaCy output when written
to CAS XMI using cassis.

Author: paulheider

brat/sections_big-odm_brat.conf

@@ -0,0 +1,12 @@
+[ Document Data ]
+Format : .ann .txt
+Normalization Engines : SectionOntology
+
+#############################################
+## Sections
+#############################################
+
+[ Section Header ]
+Parent:       Header
+Short Name:   Section
+Type Prefix:  T

brat/sections_ontology_brat.conf

@@ -0,0 +1,12 @@
+[ Document Data ]
+Format : .ann .txt
+Normalization Engines : ClinicalSectionOntology
+
+#############################################
+## Sections
+#############################################
+
+[ Section Header ]
+Parent:       Header
+Short Name:   SectionHeader
+Type Prefix:  T

brat/sections_textractor_brat.conf

@@ -0,0 +1,12 @@
+[ Document Data ]
+Format : .ann .txt
+Normalization Engines : Textractor
+
+#############################################
+## Sections
+#############################################
+
+[ Section Header ]
+Parent:       Header
+Short Name:   SectionHeader
+Type Prefix:  T

medspacy/sections_cas-xmi.conf

@@ -0,0 +1,27 @@
+[ XML Namespaces ]
+cas : http:///uima/cas.ecore
+custom : http:///webanno/custom.ecore
+uima : http:///edu/musc/tbic/uima.ecore
+
+[ Document Data ]
+Content XPath : ./cas:Sofa
+Content Attribute : sofaString
+
+#############################################
+## Sections
+#############################################
+
+[ Section Header ]
+Parent:       Header
+Short Name:   Header
+XPath:        ./uima:NoteSection
+Begin Attr:   beginHeader
+End Attr:     endHeader
+
+[ Section Span ]
+Parent:       FullSpan
+Short Name:   FullSpan
+XPath:        ./uima:NoteSection
+Begin Attr:   begin
+End Attr:     end
+