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carriewright11carriewright11
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adding Pheno_dendrogram info
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‎Pheno_Dendrogram.csv

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File,Kit,Batch,startingAmt,TriplicateGroup,Trip_Group,Groups,Triplicate,miRNAtotal
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newbatch_Clontech_trimmed.1_R1.fq,Clontech,Accur,1000,Clontech1000_Batch2,Clontech_1000_Batch2,C_1000_Batch2,1,1045613
3+
Illumina_trimmed.11.fq,Illumina,Accur,1000,Illumina1000_Batch2,Illumina_1000_Batch2,I_1000_Batch2,1,21528
4+
NEB_trimmed.11.fq,NEB,Accur,1000,NEB1000_Batch2,NEB_1000_Batch2,NEB_1000_Batch2,1,7151569
5+
NEXT_trimmed.11.fq,NEXTflex,Accur,1000,NEXTflex1000_Batch2,NEXTflex_1000_Batch2,NEXT_1000_Batch2,1,5054245
6+
Deduped_lib_align_seed15_acc_11_bam2fastq.fq,Deduped,Accur,1000,Deduped1000_Batch2,Deduped_1000_Batch2,D_1000_Batch2,1,390809
7+
Five_double_acc_11.fq,Fivepercent,Accur,1000,Fivepercent1000_Batch2,Fivepercent_1000_Batch2,Five_1000_Batch2,1,249834
8+
mm0_Clontech_trimmed.1_R1.fq,Clontech,Repro,100,Clontech100,Clontech_100,C_100,1,856256
9+
mm0_Clontech_trimmed.2_R1.fq,Clontech,Repro,100,Clontech100,Clontech_100,C_100,2,780446
10+
mm0_Clontech_trimmed.3_R1.fq,Clontech,Repro,100,Clontech100,Clontech_100,C_100,3,728294
11+
mm0_Clontech_trimmed.4_R1.fq,Clontech,Repro,250,Clontech250,Clontech_250,C_250,1,374487
12+
mm0_Clontech_trimmed.5_R1.fq,Clontech,Repro,250,Clontech250,Clontech_250,C_250,2,1064321
13+
mm0_Clontech_trimmed.6_R1.fq,Clontech,Repro,250,Clontech250,Clontech_250,C_250,3,687289
14+
mm0_Clontech_trimmed.7_R1.fq,Clontech,Repro,500,Clontech500,Clontech_500,C_500,1,1337503
15+
mm0_Clontech_trimmed.8_R1.fq,Clontech,Repro,500,Clontech500,Clontech_500,C_500,2,968633
16+
mm0_Clontech_trimmed.9_R1.fq,Clontech,Repro,500,Clontech500,Clontech_500,C_500,3,957220
17+
mm0_Clontech_trimmed.10_R1.fq,Clontech,Repro,1000,Clontech1000_Batch1,Clontech_1000_Batch1,C_1000_Batch1,1,527003
18+
mm0_Clontech_trimmed.11_R1.fq,Clontech,Repro,1000,Clontech1000_Batch1,Clontech_1000_Batch1,C_1000_Batch1,2,1157598
19+
mm0_Clontech_trimmed.12_R1.fq,Clontech,Repro,1000,Clontech1000_Batch1,Clontech_1000_Batch1,C_1000_Batch1,3,475178
20+
mm0_Clontech_trimmed.13_R1.fq,Clontech,Repro,1500,Clontech1500,Clontech_1500,C_1500,1,649534
21+
mm0_Clontech_trimmed.14_R1.fq,Clontech,Repro,1500,Clontech1500,Clontech_1500,C_1500,2,984284
22+
mm0_Clontech_trimmed.15_R1.fq,Clontech,Repro,1500,Clontech1500,Clontech_1500,C_1500,3,993254
23+
mm0_Clontech_trimmed.16_R1.fq,Clontech,Repro,2000,Clontech2000,Clontech_2000,C_2000,1,1185113
24+
mm0_Clontech_trimmed.17_R1.fq,Clontech,Repro,2000,Clontech2000,Clontech_2000,C_2000,2,1254961
25+
mm0_Clontech_trimmed.18_R1.fq,Clontech,Repro,2000,Clontech2000,Clontech_2000,C_2000,3,1095977
26+
mm0_Illumina_trimmed.1_R1.fq,Illumina,Repro,1000,Illumina1000_Batch1,Illumina_1000_Batch1,I_1000_Batch1,1,2140870
27+
mm0_Illumina_trimmed.2_R1.fq,Illumina,Repro,1000,Illumina1000_Batch1,Illumina_1000_Batch1,I_1000_Batch1,2,1919514
28+
mm0_Illumina_trimmed.3_R1.fq,Illumina,Repro,1000,Illumina1000_Batch1,Illumina_1000_Batch1,I_1000_Batch1,3,1738040
29+
mm0_Illumina_trimmed.4_R1.fq,Illumina,Repro,1500,Illumina1500,Illumina_1500,I_1500,1,2599593
30+
mm0_Illumina_trimmed.5_R1.fq,Illumina,Repro,1500,Illumina1500,Illumina_1500,I_1500,2,2134914
31+
mm0_Illumina_trimmed.6_R1.fq,Illumina,Repro,1500,Illumina1500,Illumina_1500,I_1500,3,2541003
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mm0_Illumina_trimmed.7_R1.fq,Illumina,Repro,2000,Illumina2000,Illumina_2000,I_2000,1,1140737
33+
mm0_Illumina_trimmed.8_R1.fq,Illumina,Repro,2000,Illumina2000,Illumina_2000,I_2000,2,2436298
34+
mm0_Illumina_trimmed.9_R1.fq,Illumina,Repro,2000,Illumina2000,Illumina_2000,I_2000,3,2508805
35+
mm0_NEB_trimmed.1_R1.fq,NEB,Repro,100,NEB100,NEB_100,NEB_100,1,8145404
36+
mm0_NEB_trimmed.2_R1.fq,NEB,Repro,100,NEB100,NEB_100,NEB_100,2,8679243
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mm0_NEB_trimmed.3_R1.fq,NEB,Repro,100,NEB100,NEB_100,NEB_100,3,2488939
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mm0_NEB_trimmed.4_R1.fq,NEB,Repro,250,NEB250,NEB_250,NEB_250,1,3089566
39+
mm0_NEB_trimmed.5_R1.fq,NEB,Repro,250,NEB250,NEB_250,NEB_250,2,8605038
40+
mm0_NEB_trimmed.6_R1.fq,NEB,Repro,250,NEB250,NEB_250,NEB_250,3,10867292
41+
mm0_NEB_trimmed.7_R1.fq,NEB,Repro,500,NEB500,NEB_500,NEB_500,1,17296101
42+
mm0_NEB_trimmed.8_R1.fq,NEB,Repro,500,NEB500,NEB_500,NEB_500,2,15369872
43+
mm0_NEB_trimmed.9_R1.fq,NEB,Repro,500,NEB500,NEB_500,NEB_500,3,13232756
44+
mm0_NEB_trimmed.10_R1.fq,NEB,Repro,1000,NEB1000_Batch1,NEB_1000_Batch1,NEB_1000_Batch1,1,21755196
45+
mm0_NEB_trimmed.11_R1.fq,NEB,Repro,1000,NEB1000_Batch1,NEB_1000_Batch1,NEB_1000_Batch1,2,23405706
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mm0_NEB_trimmed.12_R1.fq,NEB,Repro,1000,NEB1000_Batch1,NEB_1000_Batch1,NEB_1000_Batch1,3,29636135
47+
mm0_NEXT_trimmed.1_R1.fq,NEXTflex,Repro,100,NEXTflex100,NEXTflex_100,NEXT_100,1,3154860
48+
mm0_NEXT_trimmed.2_R1.fq,NEXTflex,Repro,100,NEXTflex100,NEXTflex_100,NEXT_100,2,3149737
49+
mm0_NEXT_trimmed.3_R1.fq,NEXTflex,Repro,100,NEXTflex100,NEXTflex_100,NEXT_100,3,1995406
50+
mm0_NEXT_trimmed.4_R1.fq,NEXTflex,Repro,250,NEXTflex250,NEXTflex_250,NEXT_250,1,6209790
51+
mm0_NEXT_trimmed.5_R1.fq,NEXTflex,Repro,250,NEXTflex250,NEXTflex_250,NEXT_250,2,3303141
52+
mm0_NEXT_trimmed.6_R1.fq,NEXTflex,Repro,250,NEXTflex250,NEXTflex_250,NEXT_250,3,2805247
53+
mm0_NEXT_trimmed.7_R1.fq,NEXTflex,Repro,500,NEXTflex500,NEXTflex_500,NEXT_500,1,11164816
54+
mm0_NEXT_trimmed.8_R1.fq,NEXTflex,Repro,500,NEXTflex500,NEXTflex_500,NEXT_500,2,13396548
55+
mm0_NEXT_trimmed.9_R1.fq,NEXTflex,Repro,500,NEXTflex500,NEXTflex_500,NEXT_500,3,12590077
56+
mm0_NEXT_trimmed.10_R1.fq,NEXTflex,Repro,1000,NEXTflex1000_Batch1,NEXTflex_1000_Batch1,NEXT_1000_Batch1,1,16084325
57+
mm0_NEXT_trimmed.11_R1.fq,NEXTflex,Repro,1000,NEXTflex1000_Batch1,NEXTflex_1000_Batch1,NEXT_1000_Batch1,2,10990385
58+
mm0_NEXT_trimmed.12_R1.fq,NEXTflex,Repro,1000,NEXTflex1000_Batch1,NEXTflex_1000_Batch1,NEXT_1000_Batch1,3,7802416
59+
mm0_NEXT_trimmed.13_R1.fq,NEXTflex,Repro,1500,NEXTflex1500,NEXTflex_1500,NEXT_1500,1,37572433
60+
mm0_NEXT_trimmed.14_R1.fq,NEXTflex,Repro,1500,NEXTflex1500,NEXTflex_1500,NEXT_1500,2,20010848
61+
mm0_NEXT_trimmed.15_R1.fq,NEXTflex,Repro,1500,NEXTflex1500,NEXTflex_1500,NEXT_1500,3,17233663
62+
mm0_NEXT_trimmed.16_R1.fq,NEXTflex,Repro,2000,NEXTflex2000,NEXTflex_2000,NEXT_2000,1,16973688
63+
mm0_NEXT_trimmed.17_R1.fq,NEXTflex,Repro,2000,NEXTflex2000,NEXTflex_2000,NEXT_2000,2,20367957
64+
mm0_NEXT_trimmed.18_R1.fq,NEXTflex,Repro,2000,NEXTflex2000,NEXTflex_2000,NEXT_2000,3,19210494
65+
directional_deduped_lib_align_seed15_1_bam2fastq.fq,Deduped,Repro,100,Deduped100,Deduped_100,D_100,1,176738
66+
directional_deduped_lib_align_seed15_2_bam2fastq.fq,Deduped,Repro,100,Deduped100,Deduped_100,D_100,2,165256
67+
directional_deduped_lib_align_seed15_3_bam2fastq.fq,Deduped,Repro,100,Deduped100,Deduped_100,D_100,3,141966
68+
directional_deduped_lib_align_seed15_4_bam2fastq.fq,Deduped,Repro,250,Deduped250,Deduped_250,D_250,1,365503
69+
directional_deduped_lib_align_seed15_5_bam2fastq.fq,Deduped,Repro,250,Deduped250,Deduped_250,D_250,2,273581
70+
directional_deduped_lib_align_seed15_6_bam2fastq.fq,Deduped,Repro,250,Deduped250,Deduped_250,D_250,3,209118
71+
directional_deduped_lib_align_seed15_7_bam2fastq.fq,Deduped,Repro,500,Deduped500,Deduped_500,D_500,1,422730
72+
directional_deduped_lib_align_seed15_8_bam2fastq.fq,Deduped,Repro,500,Deduped500,Deduped_500,D_500,2,505368
73+
directional_deduped_lib_align_seed15_9_bam2fastq.fq,Deduped,Repro,500,Deduped500,Deduped_500,D_500,3,530415
74+
directional_deduped_lib_align_seed15_10_bam2fastq.fq,Deduped,Repro,1000,Deduped1000_Batch1,Deduped_1000_Batch1,D_1000_Batch1,1,664129
75+
directional_deduped_lib_align_seed15_11_bam2fastq.fq,Deduped,Repro,1000,Deduped1000_Batch1,Deduped_1000_Batch1,D_1000_Batch1,2,552618
76+
directional_deduped_lib_align_seed15_12_bam2fastq.fq,Deduped,Repro,1000,Deduped1000_Batch1,Deduped_1000_Batch1,D_1000_Batch1,3,470023
77+
directional_deduped_lib_align_seed15_13_bam2fastq.fq,Deduped,Repro,1500,Deduped1500,Deduped_1500,D_1500,1,915453
78+
directional_deduped_lib_align_seed15_14_bam2fastq.fq,Deduped,Repro,1500,Deduped1500,Deduped_1500,D_1500,2,721981
79+
directional_deduped_lib_align_seed15_15_bam2fastq.fq,Deduped,Repro,1500,Deduped1500,Deduped_1500,D_1500,3,670722
80+
directional_deduped_lib_align_seed15_16_bam2fastq.fq,Deduped,Repro,2000,Deduped2000,Deduped_2000,D_2000,1,719599
81+
directional_deduped_lib_align_seed15_17_bam2fastq.fq,Deduped,Repro,2000,Deduped2000,Deduped_2000,D_2000,2,789910
82+
directional_deduped_lib_align_seed15_18_bam2fastq.fq,Deduped,Repro,2000,Deduped2000,Deduped_2000,D_2000,3,782786
83+
Five_double_1.fq,Fivepercent,Repro,100,Fivepercent100,Fivepercent_100,Five_100,1,153262
84+
Five_double_2.fq,Fivepercent,Repro,100,Fivepercent100,Fivepercent_100,Five_100,2,152212
85+
Five_double_3.fq,Fivepercent,Repro,100,Fivepercent100,Fivepercent_100,Five_100,3,97103
86+
Five_double_4.fq,Fivepercent,Repro,250,Fivepercent250,Fivepercent_250,Five_250,1,300260
87+
Five_double_5.fq,Fivepercent,Repro,250,Fivepercent250,Fivepercent_250,Five_250,2,159906
88+
Five_double_6.fq,Fivepercent,Repro,250,Fivepercent250,Fivepercent_250,Five_250,3,135539
89+
Five_double_7.fq,Fivepercent,Repro,500,Fivepercent500,Fivepercent_500,Five_500,1,540502
90+
Five_double_8.fq,Fivepercent,Repro,500,Fivepercent500,Fivepercent_500,Five_500,2,649832
91+
Five_double_9.fq,Fivepercent,Repro,500,Fivepercent500,Fivepercent_500,Five_500,3,611018
92+
Five_double_10.fq,Fivepercent,Repro,1000,Fivepercent1000_Batch1,Fivepercent_1000_Batch1,Five_1000_Batch1,1,780034
93+
Five_double_11.fq,Fivepercent,Repro,1000,Fivepercent1000_Batch1,Fivepercent_1000_Batch1,Five_1000_Batch1,2,533363
94+
Five_double_12.fq,Fivepercent,Repro,1000,Fivepercent1000_Batch1,Fivepercent_1000_Batch1,Five_1000_Batch1,3,377461
95+
Five_double_13.fq,Fivepercent,Repro,1500,Fivepercent1500,Fivepercent_1500,Five_1500,1,1820556
96+
Five_double_14.fq,Fivepercent,Repro,1500,Fivepercent1500,Fivepercent_1500,Five_1500,2,970865
97+
Five_double_15.fq,Fivepercent,Repro,1500,Fivepercent1500,Fivepercent_1500,Five_1500,3,835542
98+
Five_double_16.fq,Fivepercent,Repro,2000,Fivepercent2000,Fivepercent_2000,Five_2000,1,824122
99+
Five_double_17.fq,Fivepercent,Repro,2000,Fivepercent2000,Fivepercent_2000,Five_2000,2,988079
100+
Five_double_18.fq,Fivepercent,Repro,2000,Fivepercent2000,Fivepercent_2000,Five_2000,3,933964

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