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@Knowledge-Graph-Hub

Knowledge-Graph-Hub

Welcome to Knowledge-Graph-Hub 👋

KG-Hub, a platform that provides software development patterns for the standardized construction, exchange, and reuse of knowledge graphs. Features include a simple, modular extract-transform-load (ETL) pattern for ingest of upstream data in a Biolink-model compliant manner, cached downloads of upstream data, versioned and automatically updated builds, web-browsable storage of KG artifacts on cloud infrastructure, easy reuse of transformed subgraphs of upstream data across different projects, and easy integration of any OBO ontology.

See our pinned repositories below for quick access to our main code bases, or use the search bar to find a specific code repository.

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Pinned

  1. knowledge-graph-hub-support knowledge-graph-hub-support Public

    Issues, support, and discussion for KG-Hub. Covers tools, infrastructure, and graph projects.

    Jupyter Notebook 3 2

  2. kg-covid-19 kg-covid-19 Public

    An instance of KG Hub to produce a knowledge graph for COVID-19 response.

    Python 78 26

  3. kg-obo kg-obo Public

    A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub

    Python 28 2

  4. kg-cookiecutter kg-cookiecutter Public

    A cookiecutter template for KG generation.

    Python 2 1

Repositories

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