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Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.

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FCS-Multidimensional-Scaling

Plots the MDS (Multi-dimensional scaling) of 3 or more FCS files.

Useful for comparing the overall similarity / difference between multidimensional FCS files (e.g. those with many parameters).

Description

Inspired by the Nowicka et al workflow, I created a simple script that will perform only the MDS section.
This was mostly just to practice / learn R and dealing with FCS files and analysis tools that may be useful.

Usage

Copy / paste and run the script in R and perhaps an IDE such as R-Studio

Example Output

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