Popular repositories

1. KG4SL KG4SL Public

   Synthetic lethality (SL) is a promising gold mine for the discovery of anti-cancer drug targets. KG4SL is the first graph neural network (GNN)-based model that uses knowledge graph for SL prediction.

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2. PiLSL PiLSL Public

   PiLSL is a pairwise interaction learning-based graph neural network (GNN) model for prediction of synthetic lethality (SL) as anti-cancer drug targets. It learns the representation of pairwise inte…

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3. HiCoEx HiCoEx Public

   A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts

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4. SL_benchmark SL_benchmark Public

   Benchmarking study of machine learning methods for prediction of synthetic lethality

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5. TMELand TMELand Public

   A software tool for modeling and visualization of Waddington's epigenetic landscape based on dynamical models of gene regulatory network (GRN).

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6. KR4SL KR4SL Public

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