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@JaneliaSciComp

Howard Hughes Medical Institute

GitHub organization maintained by Scientific Computing Software at HHMI's Janelia Research Campus for use by HHMI staff and external collaborators.

Popular repositories

  1. bigstream bigstream Public

    Tools for distributed alignment of massive images

    Jupyter Notebook 61 21

  2. NIDAQ.jl NIDAQ.jl Public

    National Instruments Data Acquisition Interface

    Julia 46 16

  3. JRCLUST JRCLUST Public

    JRCLUST

    MATLAB 33 22

  4. multifish multifish Public

    EASI-FISH analysis pipeline for spatial transcriptomics

    Nextflow 30 12

  5. xarray-multiscale xarray-multiscale Public

    scalable multiscale image pyramids in python

    Python 25 2

  6. SharkViewer SharkViewer Public

    SharkViewer is a web-based viewer for SWC neuron files. It is written entirely in JavaScript using Three.js.

    JavaScript 23 9

Repositories

Showing 10 of 251 repositories