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Bug in initial_parameters #152

Bug in initial_parameters

Bug in initial_parameters #152

Workflow file for this run

name: Tests
on:
push:
branches:
- develop
jobs:
build:
runs-on: ${{ matrix.os }}
defaults:
run:
shell: bash -l {0}
strategy:
matrix:
os: [ubuntu-latest, macos-latest, windows-latest]
python-version: ["3.9", "3.10", "3.11"]
steps:
- uses: actions/checkout@v2
- name: Set up Python
uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: test
auto-update-conda: true
python-version: ${{ matrix.python-version }}
channels: conda-forge
allow-softlinks: true
channel-priority: flexible
show-channel-urls: true
- name: Install dependencies
run: |
conda install --yes pip
pip install coverage
pip install coveralls
conda install --yes numpy scipy scikit-learn nltk nose b4msa evodag cython IngeoML
pip install jax
pip install optax
python -c "import nltk; nltk.download('stopwords')"
python setup.py build_ext --inplace
- name: Tests on Linux
if: ${{ runner.os == 'Linux' }}
run: |
which python
python --version
which coverage
nosetests --verbose --with-coverage --cover-package=EvoMSA EvoMSA/tests
- name: Tests on macOS and Windows
if: ${{ runner.os != 'Linux' }}
run: |
nosetests --verbose EvoMSA/tests
- name: coveralls
if: ${{ runner.os == 'Linux' }}
env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
run: |
coveralls --service=github