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@IDEELResearch

IDEEL - Infectious Disease Epidemiology and Ecology Lab

Popular repositories

  1. vcfdo vcfdo Public

    Some tools for processing and annotating VCF files, with focus on Plasmodium spp

    Python 6 3

  2. NGS_Align_QC_Pipelines NGS_Align_QC_Pipelines Public

    IDEEL pipelines for next-generation sequence quality control and analysis

    Python 3 1

  3. nanopore-pipelines nanopore-pipelines Public

    Scripts and pipelines for analyzing Oxford Nanopore long-read data

    Shell 3 3

  4. vcfRmanip vcfRmanip Public

    Various interactive tools for wrangling vcf data with a focus on malaria (dependent on vcfR).

    R 1 1

  5. hbv_hover hbv_hover Public

    Analysis of households and individuals enrolled in HOVER-HBV study in Kinshasa, DRC

    R 1 1

  6. PanPlasm_Spec PanPlasm_Spec Public

    Identifying Plasmodium primers for NGS speciation

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