Cg im molseq work in progress 2

[khalifa-aly]

HL7 FHIR Pull Request

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Description

Updating Molecular Sequence resource to be definitional and how it represent sequences using various approaches.

[lmckenzi]

It looks like compartments.xml didn't get normalized before being committed? (Or it could be it wasn't normalized by whoever committed before you...) Can you run a local build and see if that file changes, and if so, commit it to the branch?

[khalifa-aly]

I ran a local build, compartment.xml has not changed, and I got the build errors, below:
ERROR @ MolecularSequence: Resource MolecularSequence in compartment patient: parameter subject was not found (subject) (src = ResourceValidator)
ERROR @ compartment.patient.MolecularSequence.subject: Search Parameter 'subject' not found (src = ResourceValidator)

I commented out the subject cell from the relevant MolecularSequence row, re-ran the build and I got a successful build.
I commented this change and the Azure pipeline ran successfully.

[lmckenzi]

There's now a commented row in compartments.xml. compartments.xml is a spreadsheet, so it shouldn't have comments...