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Bump pygmt from 0.11.0 to 0.12.0, geopandas to 0.14.0, jupyterlab to 4.1.8 #53

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merged 3 commits into from
May 1, 2024

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@weiji14 weiji14 commented May 1, 2024

Supersedes #51, part of GenericMappingTools/pygmt#3180

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@weiji14 weiji14 self-assigned this May 1, 2024
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weiji14 commented May 1, 2024

Wait a little bit first before merging:

Step 49/64 : RUN TIMEFORMAT='time: %3R' bash -c 'time ${MAMBA_EXE} env update -p ${NB_PYTHON_PREFIX} --file "environment.yml" && time ${MAMBA_EXE} clean --all -f -y && ${MAMBA_EXE} list -p ${NB_PYTHON_PREFIX} '
 ---> Running in fd5efeedc873
Channels:
 - conda-forge
Platform: linux-64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed
�[91m
PackagesNotFoundError: The following packages are not available from current channels:

  - pygmt=0.12.0*

Current channels:

  - https://conda.anaconda.org/conda-forge/linux-64

To search for alternate channels that may provide the conda package you're
looking for, navigate to

    https://anaconda.org

and use the search bar at the top of the page.


�[0m�[91mtime: 15.959
�[0m ---> Removed intermediate container fd5efeedc873
The command '/bin/sh -c TIMEFORMAT='time: %3R' bash -c 'time ${MAMBA_EXE} env update -p ${NB_PYTHON_PREFIX} --file "environment.yml" && time ${MAMBA_EXE} clean --all -f -y && ${MAMBA_EXE} list -p ${NB_PYTHON_PREFIX} '' returned a non-zero code: 1

@weiji14 weiji14 marked this pull request as ready for review May 1, 2024 23:12
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weiji14 commented May 1, 2024

Hmm, the repo2docker workflow doesn't seem to run (we might need to update it a bit, I see a lot of old versions used).

I've manually tested the Binder link though at https://mybinder.org/v2/gh/GenericMappingTools/try-gmt/pygmt-v0.12.0, the pygmt-demo.ipynb notebook seems to work fine:

image

@seisman seisman merged commit 1e3d2b9 into main May 1, 2024
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@seisman seisman deleted the pygmt-v0.12.0 branch May 1, 2024 23:57
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