BCC_Lattice_Model

MATLAB script to make 3D Body centered cubic (BCC) lattice or 2D hexagonal lattice models for mammary organoids.

simulate_tissues.m Generate lattices of different sizes and cell proportions

make_tissue_cube.m Generate BCC lattice

make_tissue_2Dhex.m Henerate hexagonal lattice

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
README.md		README.md
backup.m		backup.m
edges_energy.m		edges_energy.m
edgetypes.m		edgetypes.m
evolve_tissue.m		evolve_tissue.m
find_datadir.m		find_datadir.m
isneighbor.m		isneighbor.m
make_tissue.m		make_tissue.m
make_tissue_2Dhex.m		make_tissue_2Dhex.m
make_tissue_cube.m		make_tissue_cube.m
make_tissue_flat.m		make_tissue_flat.m
plot_centers2D.m		plot_centers2D.m
plot_idx2D.m		plot_idx2D.m
plot_idx3D.m		plot_idx3D.m
plot_tissue.m		plot_tissue.m
quantify_tissue.m		quantify_tissue.m
reset_tissue.m		reset_tissue.m
scripts.m		scripts.m
simulate_sorting.m		simulate_sorting.m
simulate_tissues.m		simulate_tissues.m
tissue_energy.m		tissue_energy.m
tissue_xs.m		tissue_xs.m
tocstring.m		tocstring.m

Gartner-Lab/BCC_Lattice_Model