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GabrielNakamura/README.md

Hi there 👋

I am Gabriel Nakamura 👋, a brazilian Ecologist working on the development of numerical methods in between community ecology, macroevolution, and biogeography. My most recent projects involve:

  • Mapping biological knowledge shortfalls and their impacts on ecological and macroevolutionary patterns
  • Developing methods to unveil the imprints of competition in deep time and macroevolutionary dynamics
  • Investigate systemic biases in citation dynamics in Ecology and Evolution

Please check out my website 🏠 https://gabrielnakamura.netlify.app/ for more info.

✨Repo highlights✨

Here, you will find repositories for published papers, ongoing projects, and some R packages.

R packages in which I am the maintainer 📦

  • FishPhyloMaker: An R package to build fish phylogenies based on taxonomic hierarchy Publication 🐟
  • Herodotools: R package dedicated with metrics and methods for Historical Biogeography and Macroevolution Publication 🌎
  • McFly: Simulation framework to estimate the influence of niche adaptation rate and dispersal limitation on species diversity distribution across environmental gradients Preprint 🚘
  • Dimensionality: Dimensionality metrics for metacommunities Publication

Popular repositories

  1. Herodotools Herodotools Public

    Herodotools: R package for analysis of historical biogeography

    HTML 7

  2. FishPhyloMaker FishPhyloMaker Public

    Making phylogenies for a list of fish species

    R 6 5

  3. Curso_UFRGS_organizacao_de_dados Curso_UFRGS_organizacao_de_dados Public

    Repositório com materiais para o curso "Organização de dados biológicos e reprodutibilidade de projetos científicos" ministrado no PPG Ecologia UFRGS

    HTML 6 5

  4. USP_reproducibility_BIE5798 USP_reproducibility_BIE5798 Public

    Site para material de suporte da disciplina USP

    HTML 5

  5. Data_MS-mcfly Data_MS-mcfly Public

    Data and R scripts that allows to fully reproduce the analysis presented in the manuscript entitled "There and Back to the Present: An Evolutionary Tale on Biological Diversity"

    R 2

  6. Decolonizing_expertise Decolonizing_expertise Public

    Analysis of citation bias in ecological research

    2