EmbryoPhenomics
Popular repositories
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embryocv_data_view
embryocv_data_view PublicA little interactive app for visualising individual level phenome data from EmbryoCV.
Python 2
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LabEmbryoCam
LabEmbryoCam PublicHardware and software for building and running a LabEmbryoCam system for phenotyping aquatic embryos
C 2
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fast_img_compile
fast_img_compile PublicParallel processing script for concatenating image sequences into AVI videos, specifically for MicroManager acquisitions.
Python 1
Repositories
- LabEmbryoCam_V2 Public
- dev-resnet Public
3D ConvNet for automating the detection of developmental events. Weights, training and inference scripts are included.
- LabEmbryoCam Public
Hardware and software for building and running a LabEmbryoCam system for phenotyping aquatic embryos
- embryo_segmentation Public
Models, weights and scripts for semantic segmentation of embryos in microscopy images. Including popular CNNs such as UNet, PSPnet and DeepLabV3.
- egg_detection Public
Egg detection in microscopy images using 2D ConvNets. Weights currently available for Lymnaea stagnalis.
- fast_img_compile Public
Parallel processing script for concatenating image sequences into AVI videos, specifically for MicroManager acquisitions.
- embryocv_data_view Public
A little interactive app for visualising individual level phenome data from EmbryoCV.
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