fix: make installataion conda friendly

the pip installation was fixed but due different packages present in conda and pip this should be a broad fix.
EI-CoreBioinformatics · Jun 6, 2023 · 754aebf · 754aebf
1 parent 9129dbf
commit 754aebf
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diff --git a/environment.yml b/environment.yml
@@ -23,7 +23,7 @@ dependencies:
   - pyyaml>=5.1.2
   - scipy>=1.3.1
   - snakemake-minimal>=5.7.0
-  - sqlalchemy==1.4.48
+  - sqlalchemy>1.4.0,<2
   - sqlalchemy-utils==0.34.1
   - sqlite
   - tabulate>=0.8.5

diff --git a/requirements.txt b/requirements.txt
@@ -11,7 +11,7 @@ pysam>=0.15.3
 pyyaml>=5.1.2
 scipy>=1.3.1
 snakemake>=5.7.0
-sqlalchemy==1.4.48
+sqlalchemy>1.4.0,<2
 sqlalchemy-utils==0.37
 tabulate>=0.8.5
 pytest>=5.4.1