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DominikMartinat/rdf-mmdb

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rdf-mmdb

RDF project for MolMeDB. This repository was founded for purpose of my thesis on incerasing interoparability of MolMeDB database.

  • Shex files contain schema for data model.

  • Turtle files contain R2RML mappings and membranes_to_CHEBI.ttl is file with links between membranes and their membrane components in CHEBI database. Data about darabases for referencing in references_data.ttl

  • Vocabulary is stored in vocabulary.rdfs file.

  • SPARQL endpoint prototype accessible HERE.

RDF data model

Original SQL schema of MolMeDB.

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Following diagrams are obsolete right now. Substances.

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Membrane interactions.

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Transporter interactions.

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Publications. This one will be simplified.

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