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@ComputationalSystemsBiology

Computational Systems Biology group

Developing efficient tools to process functional genomic data and build computational models of regulatory networks.

Popular repositories

  1. Single-cell-RNA-seq Single-cell-RNA-seq Public

    Workflows for handling automatic single-cell RNA seq analysis

    Java 8

  2. ExoProfiler ExoProfiler Public

    Analyzing transcription factor (TF) binding sites using ChIP-exo data.

    Python 5 1

  3. GINsimScripts GINsimScripts Public

    Python 3

  4. BCMLtoSBMLconverter BCMLtoSBMLconverter Public

    A set of Python scripts to convert BCML format to SBML.

    Python

  5. EoulsanDockerFiles EoulsanDockerFiles Public

  6. echinodal_notebook echinodal_notebook Public

    Analysis of the GRN governing the dorsal-ventral axis specification of the sea urchin Paracentrotus Lividus using logical modelling tools (GINsim, EpiLog, MaBoSS)

    HTML

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