Brody-Lab
Popular repositories
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PulseInputDDM
PulseInputDDM PublicA Julia library for fitting DDMs to pulse-based evidence accumulations task data
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chronic_neuropixels
chronic_neuropixels PublicRepository of code, data and CAD files associated with Luo*, Bondy* et al (2020). "An approach for long-term, multi-probe Neuropixels recordings in unrestrained rats"
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Kilosort2
Kilosort2 PublicForked from MouseLand/Kilosort
Fast spike sorting with drift correction for up to a thousand channels
MATLAB 1
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DePasquale-eLife-2023
DePasquale-eLife-2023 PublicData and analysis notebooks for DePasquale et. al eLife 2023 submission
Jupyter Notebook 1
Repositories
- jbreda_animal_training Public
Repository for the ingestion, cleaning and visualization of behavioral experiments
- flexible_decision_making_rnn Public
- MixtureAgentsModels Public
- datajoint-tutorials Public Forked from datajoint/datajoint-tutorials
Getting started materials for DataJoint - with Calcium Imaging, Electrophysiology, Machine Learning examples
- neu_437_public Public
Public-facing repository for NEU 437 problem sets. Includes python notebooks (without answers) and associated data.
- accumulation-model Public Forked from alexpiet/accumulation-model
Code for forward and backwards analytical solution to a drift diffusion advection model with pulse-based evidence
- neuroGLM Public Forked from pillowlab/neuroGLM
Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).
- adrian_striatum_analysis Public
code for wrangling and organizing striatum ephys recordings and associated GLM fits
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- chronic_neuropixels Public
Repository of code, data and CAD files associated with Luo*, Bondy* et al (2020). "An approach for long-term, multi-probe Neuropixels recordings in unrestrained rats"
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