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  • Aberystwyth

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Pinned

  1. Afanc Afanc Public

    Afanc high-resolution metagenomics disambiguator

    Python 2

  2. NGS-Gini-Analysis-Toolkit NGS-Gini-Analysis-Toolkit Public

    Calculate the Gini coefficient and Gini-granularity curve of read coverage over a genome sequence assembly.

    Python

  3. TreeMer TreeMer Public

    A simple tool to generate hierarchical clustering trees from nucleotide sequences. Supports a number of distance metrics and clustering algorithms. Includes a large testset of SARSCOV2 genomes.

    Python 1

  4. BlooMine BlooMine Public

    A Bloom filter driven read filtering tool for investigating variation of a target locus within a single read set.

    C++ 1

  5. CGR CGR Public

    Chaos Games Representation of Biological Sequences

    Python

  6. Parapipe Parapipe Public

    dev

    Python