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@AllenCell

Allen Institute for Cell Science

Allen Institute Open Source projects for general use.

Popular repositories

  1. aics-ml-segmentation aics-ml-segmentation Public

    Python 30 7

  2. aics-segmentation aics-segmentation Public

    Part 1 of Allen Cell and Structure Segmenter: classic image segmentation workflow

    Jupyter Notebook 25 12

  3. cvapipe_analysis cvapipe_analysis Public

    Analysis of data produced by cvapipe for the variance paper

    Jupyter Notebook 21 6

  4. aics-shparam aics-shparam Public

    Python 17 3

  5. napari-allencell-segmenter napari-allencell-segmenter Public

    A plugin that enables image segmentation provided by Allen Institute for Cell Science

    Python 17 6

  6. segmenter_model_zoo segmenter_model_zoo Public

    scripts and API for running Deep Learning models from segmenter

    Jupyter Notebook 10 1

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