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Fix 1d HDF5 compilation (#3939) #2701

Fix 1d HDF5 compilation (#3939)

Fix 1d HDF5 compilation (#3939) #2701

Workflow file for this run

name: PETSc
on: [push, pull_request]
concurrency:
group: ${{ github.ref }}-${{ github.head_ref }}-petsc
cancel-in-progress: true
jobs:
test-petsc-cpu-2d:
name: GCC 2D EB PETSc@3.18.1
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v4
- name: Dependencies
run: |
.github/workflows/dependencies/dependencies.sh
.github/workflows/dependencies/dependencies_clang-tidy-apt-llvm.sh 17
.github/workflows/dependencies/dependencies_ccache.sh
- name: Set Up Cache
uses: actions/cache@v4
with:
path: ~/.cache/ccache
key: ccache-${{ github.workflow }}-${{ github.job }}-git-${{ github.sha }}
restore-keys: |
ccache-${{ github.workflow }}-${{ github.job }}-git-
- name: Build PETSc
run: |
wget -q https://github.com/petsc/petsc/archive/refs/tags/v3.18.1.tar.gz
tar xfz v3.18.1.tar.gz
cd petsc-3.18.1
export PETSC_DIR=${PWD}
./configure --prefix=${PWD}/petsc
make -j 4
make install
cd ../
- name: Build and Run Test
run: |
export CCACHE_COMPRESS=1
export CCACHE_COMPRESSLEVEL=10
export CCACHE_MAXSIZE=90M
export CCACHE_EXTRAFILES=${{ github.workspace }}/.clang-tidy
export CCACHE_LOGFILE=${{ github.workspace }}/ccache.log.txt
ccache -z
export AMREX_PETSC_HOME=${PWD}/petsc-3.18.1/petsc
cd Tests/LinearSolvers/CellEB
make -j4 USE_MPI=TRUE USE_PETSC=TRUE DIM=2 TEST=TRUE \
CCACHE=ccache
mpiexec -n 2 ./main2d.gnu.TEST.MPI.ex inputs.rt.2d.petsc
${{github.workspace}}/Tools/C_scripts/mmclt.py --input ${{github.workspace}}/ccache.log.txt
make -j4 -k -f clang-tidy-ccache-misses.mak \
CLANG_TIDY=clang-tidy-17 \
CLANG_TIDY_ARGS="--config-file=${{github.workspace}}/.clang-tidy --warnings-as-errors=*"
ccache -s
du -hs ~/.cache/ccache
save_pr_number:
if: github.event_name == 'pull_request'
runs-on: ubuntu-latest
steps:
- name: Save PR number
env:
PR_NUMBER: ${{ github.event.number }}
run: |
echo $PR_NUMBER > pr_number.txt
- uses: actions/upload-artifact@v4
with:
name: pr_number
path: pr_number.txt
retention-days: 1