pytest: ignore log(0) warnings #2448
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The warning/error in AMICI-dev#2444 is caused by `petab.parameters.scale()`. Whether this warning should be suppressed there or not is to discussed in the PEtab context. For amici, I'd say we're fine with just accepting `np.log(0) == -inf` without a warnings. Closes AMICI-dev#2444.
Codecov ReportAll modified and coverable lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## develop #2448 +/- ##
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- Coverage 77.64% 77.62% -0.02%
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Files 324 324
Lines 20928 20928
Branches 1464 1464
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- Hits 16249 16246 -3
- Misses 4676 4679 +3
Partials 3 3
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FFroehlich
approved these changes
May 15, 2024
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The warning/error in #2444 is caused by
petab.parameters.scale(). Whether this warning should be suppressed there or not is to discussed in the PEtab context. For amici, I'd say we're fine with just acceptingnp.log(0) == -infwithout a warning.Partial fix for #2444.