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Issues: bento-platform/bento_variant_service

20 Open 6 Closed
20 Open 6 Closed
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Issues list

Add filter/qual to Variant/Call for more filtering/display ability
#30 opened Oct 30, 2020 by davidlougheed
Remove old chord_assembly_id header info
#29 opened Mar 25, 2020 by davidlougheed
Calculate hashes in workflows for multiple ingestion purposes
#27 opened Mar 18, 2020 by davidlougheed
Add gene annotation querying based on refseq
#26 opened Mar 12, 2020 by davidlougheed
2
Add ability to return private-queried rows as a VCF
#25 opened Mar 9, 2020 by davidlougheed
Incorporate N wildcard base into querying
#24 opened Mar 9, 2020 by davidlougheed
Add /files endpoint for linking to DRS objects for viewing in IGV.JS
#23 opened Mar 6, 2020 by davidlougheed
Move assembly ID to table level?
#21 opened Feb 28, 2020 by davidlougheed
Add table summary statistics by reference genome
#20 opened Feb 27, 2020 by davidlougheed
Fix beacon URL
#18 opened Feb 11, 2020 by davidlougheed
Should beacons return alleles with alt genotypes only??
#17 opened Feb 10, 2020 by davidlougheed
2
Test S3 support
#14 opened Feb 6, 2020 by davidlougheed
Add a more generic variants endpoint
#13 opened Feb 6, 2020 by davidlougheed
Add tests for no-results tables
#12 opened Jan 27, 2020 by davidlougheed
Add tests for helper script
#11 opened Jan 15, 2020 by davidlougheed
Speed up VCF annotation
#9 opened Jan 8, 2020 by davidlougheed
Add event pub/sub for refreshing vcf-loaded variants
#7 opened Jan 6, 2020 by davidlougheed
Investigate timing attacks with VCFs
#6 opened Jan 3, 2020 by davidlougheed
Add tests relating to the "pipelining" of detecting start/end pos for tabix
#5 opened Dec 17, 2019 by davidlougheed
Quality control and normalization pipeline
#3 opened Nov 26, 2019 by davidlougheed
3 tasks
ProTip! What’s not been updated in a month: updated:<2024-05-02.