A Python toolkit/library for reality-centric machine/deep learning and data mining on partially-observed time series, including SOTA neural network models for scientific analysis tasks of imputation, classification, clustering, forecasting, & anomaly detection on incomplete industrial (irregularly-sampled) multivariate TS with NaN missing values

Imputation of missing values in tables.

Multivariate Imputation by Chained Equations

Data imputations library to preprocess datasets with missing data

A unified multi-task time series model.

The official PyTorch implementation of the paper "SAITS: Self-Attention-based Imputation for Time Series". A fast and state-of-the-art (SOTA) deep-learning neural network model for efficient time-series imputation (impute multivariate incomplete time series containing NaN missing data/values with machine learning). https://arxiv.org/abs/2202.08516

HandySpark - bringing pandas-like capabilities to Spark dataframes

(Python, R, C/C++) Isolation Forest and variations such as SCiForest and EIF, with some additions (outlier detection + similarity + NA imputation)

Codebook from my GWAS cookbook

CRAN R Package: Time Series Missing Value Imputation

MOMENT: A Family of Open Time-series Foundation Models

A framework for prototyping and benchmarking imputation methods

Official repository for the paper "Filling the G_ap_s: Multivariate Time Series Imputation by Graph Neural Networks" (ICLR 2022)

Time Series Data Beans: a Python toolbox loads 170 public time-series datasets for machine learning/deep learning with a single line of code.

Single (i) Cell R package (iCellR) is an interactive R package to work with high-throughput single cell sequencing technologies (i.e scRNA-seq, scVDJ-seq, scATAC-seq, CITE-Seq and Spatial Transcriptomics (ST)).

Awesome Time-Series Imputation Papers, including a must-read paper list about using deep learning neural networks to impute incomplete time series containing NaN missing values/data

Beta Machine Learning Toolkit

Race and ethnicity Imputation from Disease history with Deep LEarning

Making imputation easy

Accurate and robust imputation of scRNA-seq data