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@bcgsc

BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing Centre for Genomics and Bioinformatics Research

Pinned

  1. RNA-Bloom RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 82 7

  2. LongStitch LongStitch Public

    Correct and scaffold assemblies using long reads

    Makefile 41 8

  3. ntRoot ntRoot Public

    🌳 Human ancestry inference from genomic data

    Python 2

  4. btllib btllib Public

    Bioinformatics Technology Lab common code library

    C++ 20 5

  5. ntEdit ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 61 9

  6. goldrush goldrush Public

    Linear-time de novo Long Read Assembler

    C++ 30 2

Repositories

Showing 10 of 114 repositories
  • pori_ipr_api Public

    Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform

    JavaScript 8 0 0 1 Updated May 31, 2024
  • btl Public

    🔬 Bioinformatics Technology Lab, Genome Sciences Centre

    HTML 1 3 4 0 Updated May 30, 2024
  • pori_ipr_client Public

    Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

    TypeScript 8 GPL-3.0 1 0 1 Updated May 30, 2024
  • pori_graphkb_loader Public

    The Loaders for GraphKB. Imports content from external sources via the GraphKB REST API

    JavaScript 6 GPL-3.0 4 12 3 Updated May 29, 2024
  • Python 0 GPL-3.0 1 0 0 Updated May 29, 2024
  • tr_catalog Public

    Tandem repeat catalog from public long-read sequence assemblies

    0 0 0 0 Updated May 28, 2024
  • ntJoin Public

    đź”—Genome assembly scaffolder using minimizer graphs

    Python 80 GPL-3.0 15 2 0 Updated May 27, 2024
  • pori_graphkb_client Public

    Front-end web client for the GraphKB project

    TypeScript 9 GPL-3.0 1 14 2 Updated May 22, 2024
  • rAMPage Public

    rAMPage: Rapid AMP Annotation and Gene Estimation

    Shell 5 GPL-3.0 1 0 0 Updated May 21, 2024
  • ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 61 GPL-3.0 9 1 0 Updated May 21, 2024

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