Issues: zyxue/kleat
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Probably only one end o f a blank contiguous could support a clv depending on the the strand of the annotated genes
bug
Something isn't working
high priority
#21
opened Aug 7, 2018 by
zyxue
Make window_size adjustable when searching for polyadenylation signal hexamer
enhancement
New feature or request
#20
opened Jul 26, 2018 by
zyxue
visualize-alignment.py enhancement
enhancement
New feature or request
#19
opened Jul 24, 2018 by
zyxue
2 tasks
Format test case doc strings
Easy
help wanted
Extra attention is needed
#17
opened Jul 20, 2018 by
zyxue
Refactor calc_genome_offset with skip_check_size
enhancement
New feature or request
#14
opened Jul 17, 2018 by
zyxue
Unify tail_side and tail_base, and other names that indicates the same information
enhancement
New feature or request
#11
opened Jul 15, 2018 by
zyxue
Think through hardclip from softclip
enhancement
New feature or request
question
Further information is requested
#7
opened Jul 13, 2018 by
zyxue
Remove window default value for extract_seq in contig PAS hexamer search
enhancement
New feature or request
#6
opened Jul 13, 2018 by
zyxue
Output a comprehensive list of PAS hexamers available in upstream regardless of their strength
#4
opened Jul 12, 2018 by
zyxue
Infer ref_clv from chimeric contigs
enhancement
New feature or request
#1
opened Jul 10, 2018 by
zyxue
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