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16 followers · 12 following
  • J. Craig Venter Institute
  • La Jolla, CA

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  1. JCVenterInstitute/celligrate JCVenterInstitute/celligrate Public

    Software suite for marker gene identification and cell type integration from single cell RNA-sequencing data

    HTML 3

  2. JCVenterInstitute/FRmatch JCVenterInstitute/FRmatch Public

    Cell type matching in single-cell RNA-sequencing data using FR-Match

    R 19 2

  3. JCVenterInstitute/NSForest JCVenterInstitute/NSForest Public

    A machine learning method for the discovery of the minimum marker gene combinations for cell type identification from single-cell RNA sequencing

    HTML 50 16

  4. FUNNEL-GSEA-R-Package FUNNEL-GSEA-R-Package Public

    Zhang et al. 2017. FUNNEL-GSEA: FUNctioNal ELastic-net regression in time-course gene set enrichment analysis. Bioinformatics, 33(13), 1944-1952.

    R 6 2

  5. PBtest-R-Package PBtest-R-Package Public

    Zhang et al. 2019. Highly Efficient Hypothesis Testing Methods for Regression-type Tests with Correlated Observations and Heterogeneous Variance Structure. BMC Bioinformatics, 20:185.

    R 3

  6. simDeNet-R-Package-Shiny simDeNet-R-Package-Shiny Public

    Zhang et al. 2021. The effect of tissue composition on gene co-expression, Briefings in Bioinformatics, 22(1), 127-139.

    R 2 1