Pinned

1. gene_info gene_info Public

   get information about the number of introns and the length of genes from the GFF3 file

   Python 1 1

2. stringtie_FPKM.py stringtie_FPKM.py

   1

   #!/usr/bin/env python

   2

   # -*- coding:utf-8 -*-

   3

   # Written by Wu, Yang <wuyang@vt.edu>

   4

   5

   '''

3. fastx_subseq fastx_subseq Public

   This script can extract FASTA/Q subseq extremely fast but consumes memory a lot.

   Python

4. r2g r2g Public

   A homology-based, computationally lightweight pipeline for discovering genes in the absence of an assembly

   Python 49 2

5. r2g.docker r2g.docker Public

   The Docker integration for the r2g project.

   Dockerfile

6. bioconda bioconda Public

   This is the Bioconda integrated with Docker and GitHub Actions.

   Dockerfile