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23 Open 60 Closed
23 Open 60 Closed
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Issues list

replace read end and quality trimming to use fastp
#120 opened Feb 16, 2024 by yannickwurm
2
wording issue in test
#119 opened Oct 6, 2023 by yannickwurm
we should replace mpileup
#118 opened Oct 3, 2023 by yannickwurm
CLI bootcamp - less vcf
#114 opened Sep 25, 2023 by yannickwurm
CLI bootcamp display is crappy in some in-classroom web browsers
#113 opened Sep 25, 2023 by yannickwurm
Advanced tools want to be installed on the command line bootcamp
#112 opened Sep 25, 2023 by yannickwurm
1
Man cd command not working in command line bootcamp
#111 opened Sep 25, 2023 by AlexisGGk
seqtk -L command description may be ambigous
#110 opened Oct 6, 2022 by yannickwurm
ITS coordination
#109 opened Oct 5, 2022 by yannickwurm
Does pt 5 need to be cped to the other computers?
#107 opened Oct 3, 2022 by yannickwurm
1
pt 4 mapping
#106 opened Oct 3, 2022 by yannickwurm
last practical
#100 opened Oct 4, 2021 by yannickwurm
1 of 2 tasks
1
GeneValidator wont work if many users try at the same time
#99 opened Sep 30, 2021 by gabrielluishernandez
1
strict read quality and end trimming leads to mispaired files bug important
#96 opened Sep 29, 2021 by yannickwurm
2
SequenceServer and GeneValidator are very slow
#94 opened Sep 23, 2021 by aswitwicka
3
Nice Image for contribs
#91 opened Sep 21, 2021 by yannickwurm
Assembly assignment
#81 opened Oct 6, 2020 by yeban
Last practicals issues
#80 opened Oct 6, 2020 by yannickwurm
4 of 7 tasks
4
Command line bootcamp issues
#79 opened Sep 22, 2020 by yeban
2
assembly puzzle
#78 opened Sep 17, 2020 by yannickwurm
1
Use long form command line options
#71 opened Aug 25, 2020 by yeban
SPAdes on raw reads produces more contiguous assembly than cleaned reads
#70 opened Aug 25, 2020 by yeban
kmc
#48 opened Sep 30, 2019 by yannickwurm
1
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