Skip to content

Issues: vanheeringen-lab/seq2science

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

21 Open 318 Closed
21 Open 318 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

FR: [DEG by Salmon] enhancement New feature or request
#1026 opened Feb 28, 2024 by bioinfolabmu
Q: [DEG analysis contrast] question Further information is requested
#1022 opened Dec 9, 2023 by bioinfolabmu
1
Q: [Comparative RNA-Seq analysis] question Further information is requested
#1021 opened Dec 4, 2023 by bioinfolabmu
2
STAR 2-pass alignment
#1020 opened Nov 29, 2023 by siebrenf
1
Combining STAR and Salmon
#1019 opened Nov 29, 2023 by siebrenf
5
BUG: [config.yaml error] bug Something isn't working
#1018 opened Nov 26, 2023 by bioinfolabmu
15
FR: Use temporary directories for sra and temporary fastq files enhancement New feature or request
#961 opened Mar 17, 2023 by simonvh
14
FR: single cell RNA filtering enhancement New feature or request
#924 opened Nov 24, 2022 by Maarten-vd-Sande
BUG: qc_scRNA rules dont use params, so rerunning doesn't work bug Something isn't working
#923 opened Nov 23, 2022 by Maarten-vd-Sande
FR: cleanup for manuscript enhancement New feature or request
#915 opened Nov 17, 2022 by Maarten-vd-Sande
4 of 22 tasks
@Maarten-vd-Sande @siebrenf
FR: get mitochondrial genes from genomepy for SCTK enhancement New feature or request stale Period of inactivity
#847 opened Apr 13, 2022 by siebrenf
2
incorporate single cell DESeq2? stale Period of inactivity
#837 opened Mar 29, 2022 by siebrenf
1
FR: update pyproject.toml enhancement New feature or request stale Period of inactivity
#834 opened Mar 28, 2022 by siebrenf
4
FR: flake8 enhancement New feature or request stale Period of inactivity
#833 opened Mar 28, 2022 by siebrenf
1
BUG: Complete log file is incomplete bug Something isn't working
#688 opened Apr 23, 2021 by Rebecza
1
9
BUG: Workflow not running bug Something isn't working
#681 opened Apr 13, 2021 by JihedC
20
FR: chip-R enhancement New feature or request
#624 opened Jan 13, 2021 by Maarten-vd-Sande
@Maarten-vd-Sande
FR: Order of samples in MultiQC same as in samples enhancement New feature or request wontfix This will not be worked on
#544 opened Oct 29, 2020 by Maarten-vd-Sande
5
BUG: duplicate descriptive names across assemblies bug Something isn't working help wanted Feel free to help
#477 opened Aug 21, 2020 by Maarten-vd-Sande
@Maarten-vd-Sande
1
BUG: Indexing of Spur_5.0 assembly fails bug Something isn't working wontfix This will not be worked on
#436 opened Jul 23, 2020 by Maarten-vd-Sande
7
BUG/FR: Data wrongly notated as single/paired-end bug Something isn't working enhancement New feature or request wontfix This will not be worked on
#228 opened Dec 16, 2019 by Maarten-vd-Sande
2
ProTip! Mix and match filters to narrow down what you’re looking for.