Supplementary code for "Analysing and simulating energy-based models in biology using BondGraphTools"
This repository contains code for the manuscript "Analysing and simulating energy-based models in biology using BondGraphTools"
The nbviewer links will display the notebooks containing the code for each of the examples. These notebooks can be interactively run online using the Binder links.
| Notebook | nbviewer | Binder |
|---|---|---|
| Biochemical Cycles | |
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| Multisite Phosphorylation | |
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| Ion Diffusion | |
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