Available here!
This Shiny app was built to retrieve annotations and nucleotide/amino acid sequences, as well as map between strains, of Pseudomonas aeruginosa. We currently support the following strains:
- PAO1
- PA14
- LESB58
It utilizes annotations from the Pseudomonas Genome Database, while ortholog information is taken from OrtholugeDB. Sequences are in the multi-fasta format with descriptive headings, designed to be compatible with programs such as batch submission to NCBI's BLAST. If you run into a bug or problem, open an issue and I'll look into it.
Available with the MIT license.
