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virulome

Here are 2 public repositories matching this topic...

tseemann / nullarbor

💾 📃 "Reads to report" for public health and clinical microbiology

public-health report variant-calling bacteria fastq phylogenomics denovo-assembly genotyping resistome virulome

Updated Mar 19, 2024
Perl

xiaoli-dong / pathogenseq

Pathogen whole genome sequence (WGS) data analysis pipeline

nanopore pathogen taxonomy assembly ngs amr mlst illumina plasmid serotyping virulome emm-typing capsular-typing

Updated May 2, 2024
Nextflow

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