Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
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Updated
Jun 3, 2024 - Python
Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
Stain normalization tools for histological analysis and computational pathology
I included 7 sample lung pathology images (Lung Adenocarcinoma, Squamos Cell Carcinoma, and Mesothelioma). Attached are folders containing each respective samples and specific normalization results.
Gpu accelerated vahadane stain normalization for Digital Pathology workflows.
Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms
Whole Slide Image Stain Normalisation and Augmentation
This repo contains source code for the paper: "Evaluating the Effectiveness of Stain Normalization Techniques in Automated Grading of Invasive Ductal Carcinoma Histopathological Images?"
🌟 GPU-accelerated stain normalization command line tool
stain augmentation method based on stainmix up using multiple known stain matrices.
ParamNet: a parameter-variable network for fast stain normalization
Official Repo of "MS-SST: Single Image Reconstruction-based Stain-Style Transfer for Multi-domain Hematoxylin & Eosin Stained Pathology Images"
Pytorch implementation of Self Attentive Adversarial Stain Normalization (SAASN).
RandStainNA: Simple and efficient augmentations for histology [MICCAI 2022]
Tricks based on stain variations for histology analysis
Code associated with engineering thesis "Learning-Based Staining Normalization for Improving Registration of Histology Images"
StainNet: a fast and robust stain normalization network
The code for stain standardization capsule
adaptive color deconvolution for paper "Zheng et al., CMPB, 2019"
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