Clustering scRNAseq by genotypes
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Updated
Apr 12, 2024 - Python
Clustering scRNAseq by genotypes
This repository contains R code, with which you can create 3D UMAP and tSNE plots of Seurat analyzed scRNAseq data
An R package to test for batch effects in high-dimensional single-cell RNA sequencing data.
Differential expression and allelic analysis, nonparametric statistics
Explore and share your scRNAseq clustering results
R package - Analysis of Single Cell Expression, Normalisation and Differential expression (ascend)
R package developed for single-cell RNA-seq analysis. It was designed using the Seurat framework, and offers existing and novel single-cell analytic work flows.
Cell type pipes for R
Course for LCG-UNAM at LIIGH-UNAM for March 2020 based on the book "Orchestrating Single Cell Analysis with Bioconductor" and WEHI's scRNA-seq course
Robust single cell clustering and comparison of population compositions across tissues and experimental models via similarity analysis.
This repository stores the scigenex R library.
Plot_ly-based plotting functions for use with Seurat objects
Hello there! Some code on how to merge >2 Seurat objects and maintain object identity :)
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