rna-sequencing
Here are 39 public repositories matching this topic...
A collection of source codes for network-based multi-omics analysis using integrated genome-wide association studies (GWAS) and transcriptomic data to identify genetic contribution into lithium response in patients with bipolar disorder (BD).
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Jun 25, 2022 - HTML
Git repository containing all the resources related to a school project on DNA/RNA strands construction Phylogenetic tree simulation using Functionnal Programming
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Aug 25, 2021 - OCaml
This repository houses the Genomic Sequence Comparison Code (GSCC), a collection of Python scripts designed for genomic sequence analysis. Whether you're comparing suspected sequences with known reference sequences or delving into bioinformatics, GSCC provides versatile tools for pairwise alignment. Feel free to explore!
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Mar 19, 2024 - Python
This repo is a template for running differential gene expression analysis of RNA-seq count data followed by gene set enrichment analysis. This workflow is run in R using Rmarkdown. It is based around the popular R packages, DESeq2, fGSEA, and others.
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Oct 16, 2023 - R
eproduciton of a publication regarding gene expression in different phases of lactation in humans
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Jul 2, 2023 - TeX
Gene Set Enrichment Class Analysis for heterogeneous RNA sequencing data
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Aug 13, 2020 - R
Bio Big Data and Precision Medicine Training Course
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Apr 26, 2019
Image Encryption using GENOMICS (Central Dogma algorithm).
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Dec 12, 2023 - Python
A script to find adaptor and index sequence in raw small RNA sequencing data
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Oct 23, 2021 - Shell
Inter-sample analysis of SQANTI classifications
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Aug 12, 2020 - R
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Feb 21, 2024 - Jupyter Notebook
Project to simulate simple Oxford Nanopore Technologies RNA signals
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May 15, 2024 - Python
TP Bioinformatica - UTN FRBA
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Jun 26, 2017 - Scala
Automated and friendly RNA-seq analysis (migrated to Parse Server)
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May 23, 2023 - JavaScript
Performed a differential gene expression analysis with RNA-seq that compares the expression in human control breast cancer cell lines with lines treated by silencing the NRDE2 gene. A Salmon + tximport + DESeq2 workflow was conducted to pursue this.
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Aug 28, 2020 - Shell
A portfolio of the work done during COMP 260 during S17 at Wesleyan University
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May 16, 2017 - Python
DisCoVering potential candidates of RNAi-based therapy for SARS-CoV-2 using computational methods
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Aug 27, 2020 - Python
🧬 Prediction of m6A RNA modifications on all SG-NEx direct RNA-Seq samples
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Nov 14, 2023 - Jupyter Notebook
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