VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.

Nanopore demultiplexing, QC and alignment pipeline

GWAS QC, PCA, haplotype phasing, genotype imputation

This is a warehouse quality inspection management system that helps businesses streamline their inbound and outbound quality inspection processes. The system is designed to be user-friendly and efficient, and it can be used to manage a wide variety of products and inspection criteria.

workflow to classify short-read sequencing data generated from xenograft samples

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

help in performing all gwas steps from QC to functional assessments for case-control analyses.

This is a new bootloader that can be built for a wide variety of targets, and is based around a framework-oriented API. Highly experimental, here be dragons!

R package for the MoTrPAC community

Processing suite for the Danish Digital Elevation Model

ZnQc

Quality control checks on continuous data. Example data is from a HOBO data logger with 30 minute intervals.

Create a cromphensive report of DEG list coming from any analysis of RNAseq data

ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.mutsaerts@amsterdamumc.nl. Development details can be found under the wiki tab. Code documentation can be found on the documentation website https://exploreasl.github.io/Documentation

Writes all the jiggle bones in the blender 3.0+ *for source engine*

Workflow to run bam-qc-metrics (https://github.com/oicr-gsi/bam-qc-metrics)

Autmomates the process of recording HOM dips with a Newport CONEX linear stage, a qutools quTAU and an Arroyo Instruments TECSource 5305. Developed at the Quantum Photonics group of the LLT at RWTH Aachen University.

ChIP-seq analysis pipeline