📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
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Updated
Apr 26, 2024 - Java
📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.
Protein Graph Library
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
A Python API for the RCSB Protein Data Bank (PDB)
Deep functional residue identification
A collection of useful tutorials for Protein Science
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
Structural Bioinformatics Training Workshop & Hackathon 2018
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
Ribbon diagrams of proteins in #golang.
The specification of the MMTF format for biological structures
Methods for mapping genomic data onto 3D protein structure.
A script that computationally designs a vaccine
Versatile computational pipeline for processing protein structure data for deep learning applications.
PDB parser in Haskell
Visualize and interact with Protein Data Bank (pdb) and structural files in R and Shiny
Clickable PDB statistics: synchrotrons and MX software
Visualization of proteins directly from the PDB database or from a .pdb file.
Analysis of Protein-Flavin Interactions that Control Chemical Reactivity
Open Source, Mostly just clicking mouse to finish a simulation with Ambertools and OpenMM. It was designed to use locally but another notebook to finish the simulaiton on Colab was attached as well.
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