plasmids
Here are 26 public repositories matching this topic...
Software to identify plasmid sequence data from metagenome using logistic regression and Minhash
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Nov 19, 2018 - Python
Software to identify known plasmid sequence from metagenomic assembly using Minhash
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Jan 29, 2019 - Go
A Python based server for making Gibson cloning a little faster
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Feb 24, 2019 - Python
Master thesis in molecular biology at the University of Basel.
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Apr 22, 2020 - Jupyter Notebook
Plascad is a computationally efficient tool designed for plasmids classification, antibiotic resistance genes (ARGs) annotation and plasmid visualization.
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Feb 2, 2021 - Python
Software for prediction of plasmid sequences in metagenomic assemblies
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Jun 28, 2021 - Python
Modular cloning simulation with the MoClo framework in Python
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May 3, 2022 - Python
Plasmid assembly, gene identification and annotation pipeline
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May 7, 2024 - Nextflow
An ensemble of plasmid classification tools
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Mar 28, 2023 - Shell
Tool to find mge (phages, plasmids, and transposons) in cdiff. Scripts that allow Clostyper to be run in slurm.
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Jul 31, 2023 - Python
Screen plasmids for carbapenemase resistance genes, and classify using MOB Suite
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Sep 12, 2023 - Python
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
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Sep 20, 2023 - Python
a DNA assembly library
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Dec 15, 2023 - Python
An unofficial API for Addgene, the open-source plasmid repository.
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Feb 17, 2024 - Python
Bacterial plasmid annotation pipeline
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Mar 21, 2024 - Python
A Go package for designing DNA.
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Apr 2, 2024 - Go
MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies
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Apr 6, 2024 - Python
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