Visualization of Functional Enrichment Result
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Updated
May 15, 2024 - R
Visualization of Functional Enrichment Result
Scenario analysis notebooks for the IPCC Special Report on Global Warming of 1.5°C
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways
A web application to visualize and edit pathway models
Differential gene expression analysis and pathway analysis of RNAseq data
MSigDB gene sets for multiple organisms in a tidy data format
A project for exploring differentially active signaling paths related to proteomics datasets
Testing, development environment for a new project of KN BIBS
python client for reactome content, analysis, and human functional protein interactions (FI) services api calls.
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
A Reproducible Untargeted Metabolomics Data Processing Pipeline
Enjoy your transcriptomic data and analysis responsibly - like sipping a cocktail
A Reference Pathways Mapper for turning metagenomic functional profiles into pathway/module profiles.
RNAdetector: a free user-friendly and stand-alone software for RNA-Seq data analysis
Disease pathways in the human interactome
A Python package for benchmarking pathway database with functional enrichment and classification methods
Overrepresentation analysis for KEGG and PID pathways using community detection
This package runs collective molecular dynamics simulations, where collective motions from anisotropic network model normal mode analysis drive all-atom dynamics through targeted molecular dynamics simulations and energy minimization
Example workflows for refine.bio data
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