NCBI Datasets is an experimental resource for finding and building datasets
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Updated
Nov 27, 2020
NCBI Datasets is an experimental resource for finding and building datasets
How to download genomes using the accession number
Genome Metadata Visualizer is a series of scripts written to process and visualise genome metadata after it is pulled from NCBI using the dataset and dataformat command line tools.
A tool to fetch Protein sequences of different subtypes of Influenza A virus from the NCBI database and create a local database to store the sequences for further library preparation used for Phage-Immunoprecipitation Sequencing.
Crawling NCBI Pubmed Data using HTML and jQuery
Bio Python Project using getopt library in python and engaging with the command line prompt.
Pull Sequence Read Archive (SRA) data into AnVIL
This Python script retrieve all children organism under an ancestor in NCBI taxonomy.
Django app for generating frequency portraits of gene sequences
Find and retrieve biological data and its metadata from NCBI
Identifying viruses as an anomaly
Julia package to handle the NCBI Taxonomy database.
A tool for manipulating fasta files and obtaining new sequence data from NCBI in fasta format
Reconfigurable Platform of Spreading Process of Global Influenza.
Python and R Scripts for Statistical analysis of available immunogobulin variable genes
An R code to convert NCBI data files into CSV
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
🌱 ➡️ 🌳 Add new taxa or taxonomic groups to the NCBI Taxdump files
Analysis of the viral genomes of SARS-CoV2 using MAFFT and igtree
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