An R-shiny package to analyse and visualise fungal gene expression data
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Updated
Mar 14, 2024 - R
An R-shiny package to analyse and visualise fungal gene expression data
Code to reproduce analyses of mouse cortical gradients
Workflow for retrieving spatial gene-expression data from the Allen Institute's Mouse Brain Atlas
Agglomerative based clustering on gene expression dataset
Fit your oversized data.frame to your console width.
A biclustering library with datasets, evaluation measures and a benchmarking framework
The Cancer Genome Atlas datbase | Cancer Classification | Deep Learning | CNN
DPre is a bioinformatic tool that enables the user to explore cell type conversion/ differentiation experiments. DPre may take the expression or the differentially regulated genes of the samples to rate transcriptional similarity with a reference dataset, the targets.
Predict the samplesizes for certain errorrates for statistical classifiers
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
This is the R code to extract Gene Expression Profiles of particular genes from GEO (Gene Expression Omnibus) datasets.
An interactive Streamlit app for processing and visualizing GEO data from NCBI's Gene Expression Omnibus.
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
Implementation code for evaluating COMET approach on various simulation datasets
Repository of my internship in the RDDS lab of the University of Trento
differential expression analysis using R 🧬
Implementation of SRIQ clustering
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