microbiota
Here are 45 public repositories matching this topic...
R scripts used for analysis of data reported in Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives with Adult Patients with Celiac Disease and Controls
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Dec 18, 2017 - HTML
ECCMID 2024 Abstract #04375. Code used to perform the analysis and figures.
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Dec 11, 2023 - R
Notebooks and files necessary to replicate the graphs and analyses presented in the Preprint, doi: 10.1101/2020.09.29.20203638
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Oct 22, 2020 - HTML
Repository for pipelines and scripts to analyse microbiota
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May 29, 2023 - Shell
Amplicon sequencing data analysis of skin microbiota in the black olm subspecies using Qiime2
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Mar 3, 2023 - Jupyter Notebook
A summary of the scripts used in performing quality filtering and data analysis of Illumina high throughout bacterial sequences involved in this freshwater aquatic invertebrate microbiota study.
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Sep 17, 2020 - R
An ensemble of functions for easier and quicker preliminary microbiome analyses
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May 16, 2024 - R
This repo models the temporal dynamics of the cervicovaginal microbiome to identify targets that promote reproductive health
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Apr 18, 2021 - Jupyter Notebook
Package Containing Utility-functions to Work with Microbiota-data.
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Feb 17, 2021 - R
Association Between Gut Microbiota and Hypertension
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Jun 24, 2020 - R
Master 1 project of 4 students at Institut Agro Montpellier in collaboration with a research lab for population biology and management (CBGP) in Montpellier
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Dec 12, 2022 - HTML
Machine Learning on gut microbiota of patients with Colorectal cancer
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Nov 25, 2022 - Jupyter Notebook
Constellab brick for microbiome data analysic
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May 23, 2024 - Python
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Sep 16, 2017 - HTML
Repository for 16S paper
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Mar 29, 2019
Accurate sample inference from amplicon data with single nucleotide resolution
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Mar 11, 2024 - R
Les études de métagénomiques mettent en évidence la présence et l'absence de différentes souches dans un microbiome. Pour résumer les abondances, on peut établir des graphes de co-occurence via : Rapid inference of direct interactions in large-scale ecological networks from heterogeneous microbial sequencing data, Janko Tackmann, Joao Frederico …
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Dec 16, 2021 - Python
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