A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
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Updated
May 15, 2024 - Java
A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data
Protegenomics analysis based on Pangenome references
Reproducilble Metabolomics Workflow
RTMet is a data workflow to process FIA-MS data coming from a fermenter, find metabolites and fluxes, and send a feedback command to the fermenter.
Base Classes and Functions for Mass Spectrometry and Proteomics
autoprot provides standardised, fast, and reliable proteomics data analysis while ensuring a high customisability needed to tailor the analysis pipeline to specific experimental strategies.
The codebase of the OpenMS project
Java implementation of the latest shorthand nomenclature.
Python implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
Goslin is the Grammar on succinct lipid nomenclature.
C++ implementation of parsers for the Grammars on succinct lipid nomenclature (Goslin).
Calculation and visualization of molecular networks based on t-SNE algorithm
Picotti lab data analysis package.
Visualization and Analysis of mass spectrometric and chromatographic data.
Quantitative features for mass spectrometry data
A book written in R for the ASMS Confrence Short Course: R for Mass Spectrometrists
Tripoli imports raw mass spectrometer data files and supports interactive review and archiving of isotopic data. Tripoli facilitates visualization of temporal trends and scatter during measurement, statistically rigorous filtering of data, and calculation of statistical parameters.
DL based representation learning of MS imaging data
Python Toolkit for Mass Spectrometry
Predicting glycan structure from LC-MS/MS data
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