C++ library and cmdline tools for parsing and manipulating VCF files with python and zig bindings
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Apr 28, 2024 - C++
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haplotypecaller
Here are 4 public repositories matching this topic...
Smart and Accurate Polishing of Phase Haplotypes Integrating Read Enhancements (SAPPHIRE)
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Apr 30, 2024 - C++
Nextflow pipeline for GATK best practices (HaplotypeCaller)
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Jul 16, 2019 - Nextflow
A BioWDL workflow for generating gVCF files from BAM files.
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Apr 1, 2020 - WDL
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