Creates a Docker image that can create tiles from OME-TIFF files
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Updated
Mar 10, 2020 - Python
Creates a Docker image that can create tiles from OME-TIFF files
Creates a basic Jekyll repo, S3 bucket, and limited priv user which Travis will use to push updates
A benchmark to compare data retrieval performance for OME-TIFF and Zarr using different tile sizes and HTTP protocol versions.
Test performance of FHIR API implementations. 🚒
Python utility for converting images to zarr chunked arrays
R package for generating a reproducibility/replicability study comparison visualization
Galaxy tool wrapper around Clodius: https://github.com/hms-dbmi/clodius
R Shiny app for Vitessce, an integrative and interactive data visualization tool for exploration of spatial single-cell experiments.
Docker containers to pre-process data for visualization in the portal
Website for the PSB 2021 Workshop "Making Tools that People Will Use: User-Centered Design in Computational Biology Research".
Style guide for HuBMAP Portal development.
A tool to create scrollytelling-based stories with HiGlass.
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